Süleyman Bozkurt

Süleyman Bozkurt

Data Scientist & Bioinformatician from Frankfurt am Main, Germany

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About Me

Experienced researcher focused on proteomics, skilled in using Python and R for data analysis and visualization. Committed to turning detailed biological data into useful insights. Recognized for dedication to automation and process improvement. Developed custom tools and scripts to optimize workflows, enhance efficiency, and simplify complex tasks across professional and personal domains.

Core Values

Curiosity & Imagination
Respect & Acceptance
Freedom & Adventure
Optimization & Efficiency
Teaching & Nurturing
Collaboration & Fun

Experience & Education

  • 08/2023 – Current

    Computational Biologist

    Proteomics Unit, Goethe University Frankfurt

    • Conduct data analysis, integration, and database creation for proteomics research.
    • Contribute to the development and maintenance of the DynaTMT data analysis tool, regularly updating and documenting using GIT.
    • Provide knowledge transfer by guidance and teaching on proteomics and data analysis to team members.
    • Consult on project design and implementation, offering technical expertise to 4 collaborators.

  • 08/2019 – 06/2023

    PhD Researcher and Data Analyst

    Prof. Christian Münch, Goethe University Frankfurt

    • Specialized in mass spectrometry and proteomics, developing a novel proteomics method.
    • Engaged in 20 interdisciplinary collaborations, resulting in 10 publications.
    • Performed data analysis and visualization using Python, R, GraphPad, and Excel.
    • Developed custom scripts and GUIs for lab use and personal projects.

  • 2020 – 2022

    Python Programmer and Web Scraper (Part-Time)

    Freelancer.com and Upwork.com

    • Specialized in web scraping, text extraction, and automation using Python.
    • Created diverse scripts and applications including automated checkout bots and image processing tools.

  • 2020 – 2024 (expected)

    PhD in Biochemistry

    Goethe University Frankfurt, Germany

  • 2016 – 2019

    MSc in Medical Biotechnology

    Acibadem University, Turkey

  • 2011 – 2015

    BSc in Molecular Biology and Genetics

    Izmir Institute of Technology, Turkey

Core Competencies

Expert

Mass Spectrometry Proteomics Flow Cytometry Omics Data Analysis Python R Programming Web Scraping Automation

Basic

Machine Learning Statistical Models MongoDB PostgreSQL SQLite Javascript HTML AWS Lambda Nextflow nf-core

Soft Skills

Creative Problem-Solving Collaborative Teamwork Independent Research Results-Oriented Effective Communication Mentorship Adaptability

Portfolio

Project 1
DynaTMT Data Analysis Tool

A tool for processing and analyzing dynamic Tandem Mass Tag (TMT) proteomics data, enhancing data integration and workflow efficiency.

View on GitHub
Project 2
Automated Web Scraping Scripts

Custom Python scripts for automated data extraction, text processing, and web scraping for various freelance projects.

View on GitHub
Project 3
Lab Automation GUI

A custom Graphical User Interface (GUI) developed to simplify and automate routine data processing tasks for the biochemistry lab.

View on GitHub

Selected Publications

Current Total: 254 citations, H-Index: 8, i10-Index: 7. More on Google Scholar.

Schöfer JA*, Bozkurt S*, Michaelis JB*, Klann K, Münch C. Global mitochondrial protein import proteomics reveal distinct regulation by translation and translocation machinery.

Molecular cell. 2022;82(2):435-46. e7.

Michaelis JB, Brunstein ME, Bozkurt S, et al. Protein import motor complex reacts to mitochondrial misfolding by reducing protein import and activating mitophagy.

Nature Communications. 2022;13(1):5164.

Schmitt D, Bozkurt S, et al. Lipid and protein content profiling of isolated native autophagic vesicles.

EMBO reports. 2022;23(12):e53065.

Get In Touch

I'm always open to discussing new projects, creative ideas, or opportunities to be part of an exciting vision. Feel free to reach out to me.

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